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Friday, January 15, 2010

Search Results for DNA (1)

Biotechniques--Your Lab's Handbook!

Alternate method for purifying DNA from agarose gels ... Collection of Materials for DNA Analysis; DNA Labeling Protocols ... www.e-biotek.com ...
www.e-biotek.com/

PCR RFLP

Sep 26, 2008 ... Detection of Point Mutations by RFLP of PCR Amplified DNA ... Handbook for DNA isolation, RAPD-PCR and PCR-RFLP ... www.e-biotek.com ...
www.e-biotek.com/pcr/85-pcr-rflp.html

PCR analysis of DNA from Laser Microdissected Samples

PCR analysis of DNA from Laser Microdissected Samples. Tuesday, 25 November 2008 08:18 molecular DNA Methods ... www.e-biotek.com ...
www.e-biotek.com/dna/217-pcr-analysis-of-dna-from-laser-microdissected-samples-.html

BioProtocols--DNA protein interactions

This website is all about biotechniques. It includes hundreds of databases, bioprotocols, biomedical movies, ebooks, buffer formats, pathways, and education ...
www.e-biotek.com/protocols/ebiotek_284.htm

Dot Blot Protocols

Aug 29, 2008 ... The DNA is quantified and equal amounts are aliquoted into tubes in excess of the number of its targets in the samples, ... www.e-biotek.com ...
www.e-biotek.com/protein/142-dot-blot-protocols.html

PCR Based Molecular Cloning

Sep 26, 2008 ... a protocol which gives DNA that is clean enough for sequencing is the ... This complicates cloning, as the supposedly ... www.e-biotek.com ...
www.e-biotek.com/.../120-pcr-based-molecular-cloning.html

Mitochondrial DNA Isolation

Sep 18, 2008 ... Here is a collection of protocols for Mitochondrial DNA Isolation.
www.e-biotek.com/dna/53-mitochondrial-dna-isolation.html

DNA ligation Protocol

Aug 28, 2008 ... DNA ligation is the process of joining together two DNA molecule ends (either from the same or different molecules). ...
www.e-biotek.com/dna/141-dna-ligation-protocol-.html

End Labeling Protocols (for DNA & RNA)

Dec 4, 2008 ... End-labeled DNA fragments are used in a wide variety of. molecular biology experiments. ... DNA. Singley end-labeled DNA is used for Maxam & Gilbert sequencing,. for S1 analysis, footprinting, ... www.e-biotek.com ...
www.e-biotek.com/dna/235-end-labeling-protocols-for-dna-a-rna.html

Methylene Blue DNA staining protocol

Sep 28, 2008 ... This is a collection of protocols for Methylene Blue DNA staining.
www.e-biotek.com/dna/179-methylene-blue-dna-staining-protocol.html

Bio Video

ebiotek. Date: 03 September 2008. Category: ... The steps involve removing the DNA from an oocyte and while(unfertilized egg), and injecting the nucleus ...
www.e-biotek.com/bio-video.html

BioProtocols--Ad6

Isolation Genomic DNA,RNA,and Protein simultanously from same tissue or cells. Protocol 1. Isolation of DNA,RNA,and Protein ... www.e-biotek.com ...
www.e-biotek.com/protocols/ebiotek_058.htm

Here is a collection of protocols of Genetic Analyses for DNA Protein Interactions. ... www.e-biotek.com. Bo Blog Tags. Cellular Biology Genetics. Resources ...
www.e-biotek.com/genetics/122-genetic-analyses.html

DNA and Forensics

Jan 12, 2009 ... Any type of organism can be identified by examination of DNA sequences unique to that species. Identifying individuals within a species is ...
www.e-biotek.com/databases/251-dna-and-forensics.html

Handbook for DNA isolation, RAPD-PCR and PCR-RFLP

Here is a Handbook for DNA isolation, RAPD-PCR and PCR-RFLP.
www.e-biotek.com/.../98-handbook-for-dna-isolation-rapd-pcr-and-pcr-rflp.html

PCR Animations

Sep 26, 2008 ... The Wittwer DNA Lab in the Pathology Department, University of Utah, Salt Lake City, Utah. ... www.e-biotek.com ...
www.e-biotek.com/pcr/89-pcr-animations.html

DNA Analysis by Flow Cytometry

This is a protocol for DNA Analysis by Flow Cytometry.
www.e-biotek.com/cell/221-dna-analysis-by-flow-cytometry.html

Comet Assay

Means of measuring DNA damage, particularly DNA strand breaks. A cell is embedded in agar and exposed to a DNA-damaging agent. ... www.e-biotek.com ...
www.e-biotek.com/genetics/99-comet-assay.html

Telomere and telomerase protocols

E-mail · Print. Page 1 of 4. A telomere is a region of repetitive DNA at the end of a chromosome, which protects the end of the ... www.e-biotek.com ...
www.e-biotek.com/dna/256-telomere-and-telomerase-protocols-.html

Cell Transfection Protocols

Jan 5, 2009 ... One to two h before DNA addition to the culture remove medium and add an amount of fresh, serum free medium (DMEM/F 12 ... www.e-biotek.com ...
www.e-biotek.com/.../97-cell-transfection-protocols.html

Detailed Troubleshooting Tips for PCR

Oct 6, 2008 ... human genomic DNA= 0.1-1 μg; E.coli genomic ... MeasuresMinimize damage to template DNA by avoiding vortexing, ... www.e-biotek.com ...
www.e-biotek.com/.../197-detailed-troubleshooting-tips-for-pcr.html

Vectorette PCR

Vectorette PCR of Yeast DNA. Carl Friddle. 1) Cut 1-3 µg of clean DNA overnight with 8-10U of blunt cutting enzyme in 20µl. ... www.e-biotek.com ...
www.e-biotek.com/pcr/44-vectorette-pcr.html

SELEX—in vitro selection

On the DNA side, the SELEX protocol uses a library of synthetic oligonucleotides consisting of a random internal part and constant ... www.e-biotek.com ...
www.e-biotek.com/rna/104-selexin-vitro-selection.html

DNA Isolation, Purification and Troubleshooting

Sep 18, 2008 ... Here is a collection of protocols for DNA Isolation, Purification. In addition, troubleshooting related to theses procedures is included.
www.e-biotek.com/dna/56-dna-isolation-purification-and-troubleshooting.html -

Genomic DNA Isolation from Specific Samples

Here is a collection of protocols for Genomic DNA Isolation from Specific Samples.
www.e-biotek.com/dna/52-genomic-dna-isolation-from-specific-samples.html -

IN VITRO TRANSCRIPTION OF RNA

Sep 15, 2008 ... Cut the DNA out of the gel, remove the Agarose from the DNA, and clean up the DNA by Phenol extractions (see Protocol ... www.e-biotek.com ...
www.e-biotek.com/.../153-in-vitro-transcription-of-rna.html

DNA Methods

Bioprotocols--methodss, troubleshooting, and databases.
www.e-biotek.com/dna.html

TAIL PCR

Sep 26, 2008 ... www.lajollaneuroscience.org/sr/homepage/dna/tailpcranalysis.html. TAIL PCR Protocol The Preuss Lab ... www.e-biotek.com ...
www.e-biotek.com/pcr/47-tail-pcr.html

Laboratory Manual for Biomedical Research

Isolation of DNA,RNA, and Protein simultaneously. DNA mutation detection by SSCP .... Free Software pDRAW32 to Draw DNA Analysis Charts ... www.e-biotek.com ...
www.e-biotek.com/.../100-laboratory-manual-for-biomedical-research.html -

DNA FISH Protocol

Dec 1, 2008 ... FISH can also used to detect specific DNA sequences or gene loci (4, 15). To make DNA accessible to the probe, the cellular DNA must be ...
www.e-biotek.com/dna/229-dna-fish-protocol.html

Colony PCR Protocols

Sep 26, 2008 ... www.analytica-world.com/articles/e/65346/ ... www.e-biotek.com ... Mitochondrial DNA Isolation · Deoxyribose Isolation from DNA Degrasion ...
www.e-biotek.com/pcr/76-colony-pcr-protocols.html

DNA analysis - Biology Forum

Bioprotocols--methodss, troubleshooting, and databases.. DNA analysis - Molecular Biology Methods - Genetics - Biology Forum.
www.e-biotek.com/bio-forum.html?func=view&catid=10...

DNA Labeling Protocols

This is a collection of protocols for DNA labeling methods.
www.e-biotek.com/dna/200-dna-labeling-protocols.html

Asymmetric PCR

Sep 26, 2008 ... A PCR in which the predominant product is a single-stranded DNA, as a result of unequal primer concentrations. ... www.e-biotek.com ...
www.e-biotek.com/pcr/77-asymmetric-pcr.html

AFLP PCR

Sep 26, 2008 ... Digestion of total cellular DNA with one or more restriction enzymes and ligation of restriction half-site specific ... www.e-biotek.com ...
www.e-biotek.com/pcr/79-aflp-pcr.html

DNA Methods 3

This is a collection of web source on DNA and DNA related protocols.
www.e-biotek.com/dna/208-dna-methods-3.html

Epigenetics Protocols

It is accompanied by modifications of chromatin or DNA. www.nature.com/nrg/journal/v5/n7/glossary/nrg1378_glossary.html ... www.e-biotek.com ...
www.e-biotek.com/genetics/65-epigenetics-protocols.html

BioProtocols--video,animation 1

Biology Animation Library: from Dolan DNA Learning Center ... DNA Replication by John Kyrk. DNA Replication E-Bio @ Horton ... www.e-biotek.com ...
www.e-biotek.com/protocols/ebiotek_200.htm

Databases

... for maintaining DNA methylation. UHRF1 colocalizes with the maintenance DNA methyltransferase protein DNMT1 throughout S phase. ... www.e-biotek.com ...
www.e-biotek.com/databases.html?start=32

PCR Resource Online

A Rapid DNA Minipreparation Method Suitable for AFLP and Other PCR ... Develops technology and products for DNA and mRNA research. ... www.e-biotek.com ...
www.e-biotek.com/pcr/252-pcr-resource-online.html

Colony Hybridization

Place the membrane, DNA side up, over a dry piece of blotting paper and air dry for 30'. 7. Wrap membrane with saranwrap and ... www.e-biotek.com ...
www.e-biotek.com/dna/137-colony-hybridization-.html

http://www.e-biotek.com/home-page.html 2007-11-08 never 0.5 http ...

http://www.e-biotek.com/home-page.html 2007-11-08 never 0.5 http://www.e-biotek.com/dna.html 2008-07-06 never 0.5 http://www.e-biotek.com/rna.html ...
www.e-biotek.com/google-sitemap.html

BioProtocols--western2

www.e-biotek.com ... DNA isolation & related protocols ... Isolation of DNA,RNA, and Protein simultaneously. DNA mutation detection by SSCP ...
www.e-biotek.com/protocols/ebiotek_038.htm

PCR, RT PCR and Real Time PCR Tutorials

Sep 26, 2008 ... www.e-biotek.com ... FOR SINGLE CELL mRNA AMPLIFICATION · Detailed Troubleshooting Tips for PCR · PCR Resource Online · DNA and Forensics ...
www.e-biotek.com/.../88-pcr-rt-pcr-and-real-time-pcr-tutorials.html

Directory (1)

Protocols for DNA. 1. Methylene Blue DNA staining protocol ... DNA Isolation, Purification and Troubleshooting ... www.e-biotek.com ...
www.e-biotek.com/databases/185-directory-1.html

PCR SSCP

Sep 26, 2008 ... www.e-biotek.com ... Genomic DNA Isolation from Specific Samples · Mitochondrial DNA Isolation · Deoxyribose Isolation from DNA Degrasion ...
www.e-biotek.com/pcr/84-pcr-sscp.html

PCR Elisa

Sep 26, 2008 ... www.e-biotek.com ... Genomic DNA Isolation from Specific Samples · Mitochondrial DNA Isolation · Deoxyribose Isolation from DNA Degrasion ...
www.e-biotek.com/pcr/86-pcr-elisa.html

RAPD PCR

Sep 26, 2008 ... RAPD stands for Random Amplification of Polymorphic DNA, ... Handbook for DNA isolation, RAPD-PCR and PCR-RFLP ... www.e-biotek.com ...
www.e-biotek.com/pcr/49-rapd-pcr.html

Nested PCR

Sep 26, 2008 ... Nested PCR and Sequencing of T-DNA Junctions in Arabidopsis ECKER LAB. Protocol for nested PCR amplification. ... www.e-biotek.com ...
www.e-biotek.com/pcr/66-nested-pcr.html

Web Source of Virology

Jan 1, 2010 ... Extraction of Geminiviral DNA from a Highly Mucilaginous Plant Protocol ... Submit search form. Web, www.e-biotek.com. Bo Blog Tags ...
www.e-biotek.com/databases/255-web-source-of-virology.html

DNA RNA

Material de apoio para ser usado em sala de aula por professores de Biologia do Sistema de Ensino Newton. www.sistemanewton.com.
www.e-biotek.com/bio-video.html?task=videodirectlink&id=38

shRNA Protocols

Nov 27, 2008 ... Lentiviral Transduction Protocol.doc (Sigma). Nature Protocols: Efficient transfection of DNA or shRNA vectors. ... www.e-biotek.com ...
www.e-biotek.com/rna/227-shrna-protocols.html

Protein Purification and Identification Protocols

Dec 20, 2009 ... www.e-biotek.com ... Online Tools · Protein Protein Crosslinking Protocols · PCR Resource Online · Recombinant DNA ...
www.e-biotek.com/.../253-protein-purification-and-identification-protocols.html

FCM Annexin V Protocol

Nov 25, 2008 ... www.e-biotek.com ... FCM: CaspaTag Caspase Activity Protocol · DNA Analysis by Flow Cytometry · FCM: FASC Analysis of Cell Cycle using BrdU ...
www.e-biotek.com/cell/218-fcm-annexin-v-protocol.html

Scientists Crack Genetic Code of Two Common Cancer - Biology Forum

All cancers are caused by changes in the DNA of cells. ... scientists are examining the DNA of breast cancer, as well as cancers of the ... www.e-biotek.com ...
www.e-biotek.com/bio-forum.html?func=view&id=65...35

FCM: FASC Analysis of Cell Cycle using BrdU and PI

Nov 26, 2008 ... www.e-biotek.com ... FCM Annexin V Protocol · FCM: Calcium Flux Analysis · FCM: CaspaTag Caspase Activity Protocol · DNA Analysis by Flow ...
www.e-biotek.com/.../222-fcm-fasc-analysis-of-cell-cycle-using-brdu-and-pi.html

Protocols for SiRNA

Sep 18, 2008 ... www.e-biotek.com ... Online Tools · Protein Protein Crosslinking Protocols · PCR Resource Online · Recombinant DNA ...
www.e-biotek.com/rna/125-protocols-for-sirna.html

Wednesday, December 31, 2008

Web Source: DNA Replication, Mutation and Repair

DNA Replication, Mutation and Repair

http://www.web-books.com/MoBio/Free/Chap7.htm



Chromosomes, Chromatin, DNA Replication and Repair

http://www.dartmouth.edu/~cbbc/courses/bio4/bio4-1997/03-DNA&Chromosomes.html



Chromatin Challenges during DNA Replication and Repair .

http://linkinghub.elsevier.com/retrieve/pii/S0092867407001298



DNA Replication and Repair

bioinformatics.rit.edu/molbiol/Mol_Biol_week_4.ppt



DNA Replication, Repair, and Recombination

http://www.garlandscience.com/textbooks/081533480X/pdf/ch06.pdf



DNA Replication and Repair

http://www.csupomona.edu/~nebuckley/Courses/Bio450/Lectures/Bio%20450%20Lecture%208%20Replication%20and%20Repair.htm



DNA Replication and repair

https://eapbiofield.wikispaces.com/DNA+Replication+and+repair



DNA, DNA REPLICATION, DNA REPAIR

http://www.usd.edu/med/som/somdept/biochem/courses/bioc520/b520_413.htm



DNA Replication, Repair, and Recombination

http://www.ncbi.nlm.nih.gov/books/bv.fcgi?rid=mcb.chapter.3140



DNA replication
http://esg-www.mit.edu:8001/esgbio/dogma/repl.html



DNA repair genes
http://www.cancergenetics.org/dnafix.htm



DNA replication and repair

http://www.nature.com/nature/supplements/insights/replicationandrepair/index.html



Lecture 18: DNA Replication & Repair

http://www.bio.cmu.edu/courses/03231/LecF04/Lec18/lec18.html



Site listing for DNA replication
http://dir.niehs.nih.gov/dirlmg/repl.html

Web Source: Enzymology (2)

Advances in Enzymology

http://www3.interscience.wiley.com/bookseries/113470100/home?CRETRY=1&SRETRY=0



Computational Enzymology

http://www-fp.mcs.anl.gov/ccst/research/reports_pre1998/comp_bio/enzymology/enzymology96.html



ENZYME KINETICS "Big Three Approaches"

http://bmbiris.bmb.uga.edu/wampler/8010/lectures/kinetics/index.htm



From Protein Science to Enzymology

http://bmbiris.bmb.uga.edu/wampler/8010/lectures/enzyme/index.htm



Membrane Enzymology

http://www.rug.nl/gbb/research/researchgroups/enzymology/index



Methods in Enzymology

http://www.sciencedirect.com/science/bookseries/00766879



Ribozyme Enzymology

http://academic.brooklyn.cuny.edu/chem/zhuang/QD/toppage1.htm

Web Source: Molecular Graphics

3D Molecular Graphics

http://www.cs.umd.edu/gvil/visproteomics.shtml


A comprehensive database of molecular structures
http://www.biomednet.com/db/msd



A biocomputing hypertext coursebook
http://merlin.mbcr.bcm.tmc.edu:8001/bcd/Curric/welcome.html



A molecular graphics art show
http://www.scripps.edu/pub/goodsell/mgs_art/mgs_art.html



A more recent molecular graphics art show
http://www.scripps.edu/pub/goodsell/mgs_art/mgs_art2/index.html


A collection of biomolecular research tools
http://www.public.iastate.edu/~pedro/research_tools.html



A molecular library
http://c4.cabrillo.cc.ca.us/projects/library/



Animated and still biochemistry graphics
http://www-medlib.med.utah.edu/NetBiochem/graphlis.htm


An art gallery of molecular models
http://www2.kenyon.edu/depts/biology/eward/gallery/galleryintro.html


Biomolecular structure and modeling in the United Kingdom
http://www.biochem.ucl.ac.uk/bsm/


Biocomputing and molecular modeling
http://www-bio.unizh.ch/


Biomolecular Visualization Center
http://amanda.uams.edu/index_text.html


Computational molecular biology at NIH
http://webasaurus.dcrt.nih.gov/molbio/


CCP$ Molecular Graphics

http://www.ysbl.york.ac.uk/~ccp4mg/



Entrez: Data sets for biochemistry and molecular biology.
http://www3.ncbi.nlm.nih.gov/Entrez/index.html


Ferritin Molecular-Graphics Tutorial

http://www.chemistry.wustl.edu/~edudev/LabTutorials/Ferritin/FerritinTutorial.html


Home page for a molecular graphics laboratory
http://www.scripps.edu/pub/olson-web/


Hierarchical classification of proteins
http://www.protomap.cs.huji.ac.il/


Image library of biological macromolecules
http://www.imb-jena.de/IMAGE.html


Journal of Molecular Graphics and Modelling

http://www.sciencedirect.com/science/journal/10933263


Molecular Graphics

http://www.hhmi.swmed.edu/external/crystallography/gr1.html


Molecular Graphics (Indiana University)

http://www.iumsc.indiana.edu/graphics/index.html


Molecular Graphics Software Links

http://www.rcsb.org/pdb/static.do?p=software/software_links/molecular_graphics.html


Molecular Graphics

http://mgl.scripps.edu/people/goodsell/mgs_art/index.html


Molecular Surfaces: Molecular Graphics

http://www.netsci.org/Science/Compchem/feature14d.html


Model-building tools for molecular graphics

http://scripts.iucr.org/cgi-bin/paper?S0907444904019158


Molecular Graphics

http://www.uwm.edu/Dept/Chemistry/molxtl/


MolGraph: Molecular modeling program.
http://chemb16.leidenuniv.nl/~armand/



Molecular biology database compendium
http://www.tulane.edu/~dmsander/biotechniquessites.html


Molecular models for biochemistry
http://info.bio.cmu.edu/Courses/BiochemMols/BCMolecules.html



Molecular Models Online
http://www.webmolecules.com/index.shtml



Molecular visualization tools and sites
http://www.indiana.edu:80/~cheminfo/mvts.html



Molecular Visualization Freeware

http://www.umass.edu/microbio/rasmol/


Molecular Graphics with POVRay and Swiss PDB Viewer

http://wwwchem.leidenuniv.nl/metprot/armand/


Molecular Graphics and Modelling Society (MGMS)

http://www.mgms.org/


Molecular Graphics Applications in the CSB Core Laboratory, Yale University

http://www.csb.yale.edu/userguides/graphics/csb_hm_graph.html


Molecular Graphics and Computation Facility

http://glab.cchem.berkeley.edu/


NIH Center for Molecular Modeling
http://cmm.info.nih.gov/modeling/



Online macromolecular museum
http://www.clunet.edu/BioDev/omm/gallery.htm


Online resources for molecular biology
http://webasaurus.dcrt.nih.gov/molbio/servers.html


PovChem program for molecular graphics
http://grserv.med.jhmi.edu/~paul/Manual.html


PyMOL molecular visualization system

http://pymol.sourceforge.net/


Rendering techniques for molecular models
http://scsg9.unige.ch/fln/eng/toc.html


RCSB: The home site for all PDB files.
http://www.rcsb.org/pdb/



Software for biological data representation
http://www.sdsc.edu/pb/Software.html


Some biochemistry molecular models
http://moby.ucdavis.edu/HRM/Biochemistry/molecules.htm


Swiss PDB viewer
http://expasy.expasy.ch/spdbv/



The Molecular Graphics Laboratory The Olson Lab

http://mgl.scripps.edu/


The MolMol program for molecular visualization
http://www.mol.biol.ethz.ch/wuthrich/software/molmol/


The Journal of Molecular Modeling
http://link.springer.de/link/service/journals/00894/index.htm



The Protein Data Bank through Microsoft Windows
http://www.sdsc.edu/pb/wpdb/wpdb.htm


The "Ribbons" software home page
http://www.cmc.uab.edu/ribbons/


The Molray molecular graphics web interface homepage

http://xray.bmc.uu.se/markh/notes/howto/molray.html



Using NMR for biomolecular structures
http://www.ocms.ox.ac.uk/idc/structures/


Virtual reality and biochemistry
http://www.tc.cornell.edu:80/~richard/



VRML file creator for chemical structures
http://www2.ccc.uni-erlangen.de/services/vrmlcreator/


Visual Molecular Dynamics

http://www.ks.uiuc.edu/Research/vmd/

Molecular Graphics Applications in the CSB Core Laboratory, Yale University

http://www.csb.yale.edu/userguides/graphics/csb_hm_graph.html


Bobscript
Cambridge Structural Database
Chimera
Cn3d
Coot
DialX
DRAWNA
Explorer
Fragment
Ghostscript and Ghostview
Grasp
HOLE
IRIS Explorer
ISIS/DRAW
LIGPLOT
MAIN
Manip
MGLTools
MidasPlus
Molscript
Molecular Surface Package
Molecular Surface Viewer (MSV)
MOLMOL
Moloc
NAMOT
NAOMI
Nucplot
O
Ortep-III
PLUTON
Povscript
PyMOL
Quanta
RasMol
Raster-3D
Rayscript
Rayshade
Ribbons
SPOCK
TurboFrodo
SETOR
Sims
SURFNET
Swiss-PDBViewer
VMD
Westhof Programs
WHAT IF
Xtalview
XZAM